Package: CGExplorer
Type: Package
Title: Chemo-Genomic Screening Data Preprocessor and Visualizer
Version: 0.3.2
Authors@R: person("Qingzhou Zhang", role = c("aut", "cre"), email = "zqzneptune@hotmail.com")
Description: An R package providing S4 data structures, analysis
        methods, and a Shiny application for preprocessing, quality
        control, and chemo-genomic interaction scoring of 384-well
        plate screening datasets generated by Tecan plate readers.
        Plate data is managed via a persistent local registry
        (PlateRegistry S4 object) that accumulates across sessions and
        survives package upgrades.
License: MIT + file LICENSE
Depends: R (>= 4.1.0)
Imports: methods, shiny (>= 1.7.0), shinydashboard, shinyjs,
        shinycssloaders, golem, dplyr, tidyr, readr, readxl, lubridate,
        stringr, plotly, DT, ggplot2, grDevices, RColorBrewer, tools,
        uuid
Suggests: WriteXLS, ggrepel, testthat (>= 3.0.0)
Encoding: UTF-8
Config/testthat/edition: 3
URL: https://github.com/zqzneptune/CGExplorer
BugReports: https://github.com/zqzneptune/CGExplorer/issues
Config/roxygen2/version: 8.1.0
Collate: 'CGExplorer-package.R' 'app_server.R' 'app_ui.R' 'generics.R'
        'classes.R' 'constructors.R' 'globals.R' 'methods.R'
        'methods_batch.R' 'methods_plate.R' 'mod_batch_builder.R'
        'mod_batch_overview.R' 'mod_data_upload.R'
        'mod_layout_upload.R' 'mod_plate_card.R' 'mod_qc.R'
        'mod_scoring.R' 'parsers.R' 'plotting.R' 'plotting_pdf.R'
        'processing.R' 'run_app.R' 'scoring.R' 'staining_detect.R'
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
        libx11-dev zlib1g-dev
Repository: https://zqzneptune.r-universe.dev
Date/Publication: 2026-10-09 12:02:39 UTC
RemoteUrl: https://github.com/zqzneptune/CGExplorer
RemoteRef: HEAD
RemoteSha: 3abb4c5e7257280c41bba7b2fe0325c30ce6db66
NeedsCompilation: no
Packaged: 2026-10-09 17:27:15 UTC; root
Author: Qingzhou Zhang [aut, cre]
Maintainer: Qingzhou Zhang <zqzneptune@hotmail.com>